8:00-8:45  |
Coffee
and continental breakfast
(Byte
Café, across from the Gates entrance) |
All
 |
| 8:45-9:00 |
Welcome (Gates 104)
 |
Michael Levitt
(Stanford) |
| 9:00-9:30 |
Weighted volume derivatives |
Patrice Koehl
(Stanford) |
 |
| 9:30-10:00 |
2-D Monte Carlo chain folding, based on expansive/contractive motions |
Rachel Kolodny
(Stanford) |
|
| 10:00-10:30 |
Modeling and simulation
of lymph node germinal center reaction |
Ben Wong
(Stanford) |
|
| 10:30-11:00 |
Approximation of protein
structures for fast similarity measures |
Itay Lotan
(Stanford) |
|
| 11:30-2:00 |
Lunch
(Groups with local hosts) |
All |
| 2:00-2:30 |
Deformable spanners
for proximity maintenance and collision detection of molecular chains
(Gates 104) |
An Nguyen
(Stanford) |
|
| 2:30-3:00 |
A comparison of techniques
for incrementally updating Delaunay and power diagrams across simulation
time steps |
Daniel Russel
(Stanford) |
|
| 3:00-3:30 |
The derivatives of
backbone motion |
Kimberly Noonan
(UNC) |
|
| 3:30-4:00 |
Speeding up REDUCE
for placing hydrogen |
Leo (Yuanxin) Liu
(UNC) |
 |
| 4:30-5:30 |
PI meeting, NSF renewal
planning |
PIs only |
| 6:30-9:00 |
Dinner
(Janta
Restaurant, 369 Lytton Ave., Palo Alto) |
Official BioGeometry
dinner, costs covered |
