| 9:00 |
Welcome
by Jack Snoeyink & Pankaj Agarwal |
|
| 9:10 |
Protein interfaces
by Johannes Rudolph (Duke) |
|
| 9:55 |
Prediction of protein structure and protein-protein interactions
by Jeff Skolnick (SUNY Buffalo) |
|
| 10:45 |
Break |
|
| 11:00 |
An integrated approach to protein-protein docking
by Rong Chen (Scripps Research Inst) |
|
| 11:30 |
Fast geometric approach to predict protein docking configurations
by Yusu Wang (Duke) |
 |
| 11:50 |
Placing hydrogens by dynamic programming
by Xueyi Wang (UNC) |
|
| 12:10 |
Comprehensive evaluation of protein structure alignment methods: scoring by geometric measures
by Rachel Kolodny (Stanford) |
|
| 12:30 |
Lunch |
|
| 1:45 |
Euclidean Voronoi diagram of atoms and protein structure analysis
by Deok-Soo Kim (Hanyang University) |
|
| 2:05 |
The missing fragment problem in electron density map interpretation
by Itay Lotan (Stanford) |
|
| 2:30 |
Local conformation search by distance matrix perturbations
by Ioannis Emiris (National University of Athens, Greece) |
 |
| 2:45 |
Break |
|
| 3:15 |
Using spanners to describe protein structure
by Daniel Russel (Stanford) |
|
| 3:35 |
Using Turan graphs to compute COGS (Clusters of Orthologous Groups)
by Craig Falls (UNC) |
|
| 3:55 |
A bezier-based moving mesh framework for simulation with elastic membranes
by David Cardoze (CMU) |
|
| 4:15 |
Cell talk: algebraic model checking systems to reason about
biological processes
by Bud Mishra (NYU) |
|
| 5:05 |
Wrapup |
|
